BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A02LP1|AL429140
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1736 968 0.0
3x_Contig1676 316 5e-86
>3x_Contig1736
Length = 21222
Score = 968 bits (487), Expect = 0.0
Identities = 496/501 (99%)
Strand = Plus / Plus
Query: 1 acagtattgcatcaaagagttcagagcggtatccgaaccgagggagtcctcggtacccgg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 20722 acagtattgcatcaaagagttcagagcggtatccgaaccgagggagtactcggtacccgg 20781
Query: 61 aacattgttggataaagtggctggaatcaaaaccattgggattctgaaggctgtatagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20782 aacattgttggataaagtggctggaatcaaaaccattgggattctgaaggctgtatagtt 20841
Query: 121 ctctcttgctctttccaattgatgcmaggagacaaacgcttcaaaaccaccgacaatgat 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 20842 ctctcttgctctttccaattgatgcaaggagacaaacgcttcaaaaccaccgacaatgat 20901
Query: 181 gataccatcgaatccatacttttggaaatagtaagcmatcaaaccgatatcagcttcttc 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 20902 gataccatcgaatccatacttttggaaatagtaagcaatcaaaccgatatcagcttcttc 20961
Query: 241 aggagtntgtctgtnggtaccgatttcagaaccaccgcgggattgccatcccaaaagatc 300
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20962 aggagtatgtctgttggtaccgatttcagaaccaccgcgggattgccatcccaaaagatc 21021
Query: 301 cttccagtttagagatctcacggattcgtgtctagttaacccagtccaaccattgtaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21022 cttccagtttagagatctcacggattcgtgtctagttaacccagtccaaccattgtaaat 21081
Query: 361 tgcatatggtttgtgaccttgagacatacagtacgtagccatcgaataaactgcagagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21082 tgcatatggtttgtgaccttgagacatacagtacgtagccatcgaataaactgcagagtt 21141
Query: 421 cataccaccagctggggcaccgacattgacaatagcaatcttcatatgggtgtgttctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21142 cataccaccagctggggcaccgacattgacaatagcaatcttcatatgggtgtgttctgg 21201
Query: 481 taacttaggttcgatatggtc 501
|||||||||||||||||||||
Sbjct: 21202 taacttaggttcgatatggtc 21222
>3x_Contig1676
Length = 15800
Score = 316 bits (159), Expect = 5e-86
Identities = 184/191 (96%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 797 attctacaatctagacccaatctgtycactaagactttatgaacgtccttagatgagata 856
||||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 15797 attctacaatcta-acacaatctgtcctctaagactttatgaacgtccttagatgagata 15739
Query: 857 ggagttaagtctgctgaaatggcaccttcagcaacaataacgatagttgttctcttacct 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15738 ggagttaagtctgctgaaatggcaccttcagcaacaataacgatagttgttctcttacct 15679
Query: 917 cttgacctatgctttgaaatgatat-amacatttgatcttgccattctcttgatgatgca 975
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 15678 cttgacctatgctttgaaatgatatcacacatttgatcttgccattctcttgatgatgca 15619
Query: 976 gggttctctgg 986
|| ||||||||
Sbjct: 15618 ggtttctctgg 15608
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6557
Number of Sequences: 1807
Number of extensions: 6557
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 2
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)